Summary
Overview
Work History
Education
Skills
Publications
Conference Presentations
Awards
Reviewing Activities
Grant
Referees
Timeline
Generic
Yunlong HE

Yunlong HE

Lyon

Summary

Detail-orientated researcher and programmer analyst with vast experience in the field of computer vision and medical image analysis. Skilled in machine learning techniques and deep neural networks, with a proven track record of publishing in high-quality journals and presenting at conferences. Out-of-the-box thinker and problem solver dedicated to improving performance. Works well in teams and consistently delivers to deadlines.

Overview

8
8
years of professional experience
9
9
years of post-secondary education

Work History

Doctoral Researcher

INSA-Lyon, CREATIS
Lyon
10.2018 - 10.2022
  • Conducted PhD research titled by “Generation of diffusion tensor imaging (DTI) data of the human heart using deep convolutional adversarial networks”.
  • Gathered data from results of cardiac diffusion tensor imaging, developed and optimized deep learning algorithms using the gathered data.
  • Published 4 papers in SCI-indexed Journals, including IEEE Journal of Biomedical and Health Informatics (IEEE JBHI), IEEE Access, etc; completed and submitted a paper to IEEE Transaction on medical imaging (IEEE TMI).
  • Presented research at 3 conferences and 1 Workshop, including ICSP 2020, FIMH 2021, ICSP 2022’s workshop, etc.

Graduate Teaching Assistant & Research Assistant

ICIS lab, Shandong Normal University
Jinan
07.2017 - 07.2018
  • Assisted adviser to guide graduate students in Image Processing and Computer Vision courses,
  • Helped adviser to mentor 2 graduate students in research project management.
  • Accomplished several research works funded by National Natural Science Foundation of China (# 61572300), Shandong National Natural Science Foundation of China (# ZR2016FQ06), and Science and Technology Development Plan Project of Shandong Province in China (# J17KB177).

Graduate Researcher

ICIS Lab, Shandong Normal University
Jinan
06.2014 - 06.2017
  • Conducted master’s research titled by “Image decomposition via cooperative separation of structure, texture and bias components”.
  • Gathered data from results of fundus imging/photography and multispectral fundus imaging, developed effective segmentation algorithms with the gathered data.
  • Applied for and Awarded a patent (granted No. CN107146211A).
  • Published 5 papers in journals, including Applied Sciences, IEEE Access, etc.

Education

Ph.D. - Signal & image processing

INSA-Lyon
Lyon, France
10.2018 -

M.E. - Computer vision & medical image analysis

Shandong Normal University
Jinan, China
09.2014 -

B.S. - Computer Science

Shandong Normal University
Jinan, China
09.2011 -

Skills

Language: MATLAB, Python, C, C

undefined

Publications

  • He Y, Wang L, Yang F, Clarysse P, Zheng Y, Deng Z, Robini M, Zhu Y. Compensation of motion-induced signal loss in in vivo DTI of the human heart using GAN Based super angular resolution. IEEE transaction on medical imaging (TMI), 2023, under review.
  • He Y, Wang L, Yang F, Clarysse P, Robini M, Zhu Y. Effect of different configurations of diffusion gradient directions on accuracy of diffusion tensor estimation in cardiac DTI. IEEE ICSP’22 & 3rd Sino-French Workshop 2022, Beijing, China, October 21-24, accepted, 2022.
  • He Y, Wang L, Yang F, Clarysse P, Zhu Y. Study of motion compensation for in vivo DTI of the human heart. 2nd Sino-French Workshop on “Medical Image Analysis and AI”, Virtual, France, October 25-26, 2021.
  • He Y, Wang L, Yang F, Xia Y, Clarysse P, Zhu Y, Systematic study of joint influence of angular resolution and noise in cardiac diffusion tensor imaging. 11th International Conference on Functional Imaging and Modeling of the Heart, FIMH 2021, Stanford, CA, USA, June 21-25, LNCS, vol. 12738, pp. 200–210, 2021.
  • He Y, Wang L, Yang F, Clarysse, P, Zhu Y, Deep group-wise angular translation of cardiac diffusion MRI in q-space via manifold regularized GAN. 15th IEEE International Conference on Signal Processing, ICSP 2020, Beijing, China, December 6-9, vol. 1, pp. 511–515, 2020.
  • Jiang Y, Zheng Y, Sui X, Jiao W, He Y, Jia W. ASRNet: Adversarial Segmentation and Registration Networks for Multispectral Fundus Images. Computer Systems Science and Engineering, May Vol. 3, pp: 537-549, 2021.
  • Sui X, Zheng Y, He Y, Jia W. Symmetric Deformable Registration via Learning a Pseudomean for MR Brain Images. Journal of Healthcare Engineering. 2021 Apr 23, 2021.
  • Yang M, Zheng Y, Jia W, He Y, Che T, Cong J. Joint Deep Matching Model of OCT Retinal Layer Segmentation. Computers, Materials & Continua, vol. 3, pp.1485-1498, 2020.
  • Chen Y, Zhao Y, He Y, Xu F, Jia W, Lian J, Zheng Y. Face identification with top-push constrained generalized low-rank approximation of matrices. IEEE Access, vol. 7, pp.160998-161007, 2019.
  • He Y, Jiao W, Shi Y, Lian J, Zhao B, Zou W, Zhu Y, Zheng Y. Segmenting diabetic retinopathy lesions in multispectral images using low-dimensional spatial-spectral matrix representation. IEEE journal of biomedical and health informatics (JBHI), vol. 24, pp. 493-502, 2019.
  • Chen Y, Zhao Y, He Y, Xu F, Jia W, Lian J, Zheng Y. Face identification with top-push constrained generalized low-rank approximation of matrices. IEEE Access, vol. 7, pp. 160998–161007, 2019.
  • Sun Z, Qi M, Lian J, Jia W, Zou W, He Y, Liu H, Zheng Y. Image segmentation by searching for image feature density peaks. Applied Sciences, vol. 8, pp. 969, 2018.
  • Hou K, Liu N, Jia W, He Y, Lian J, Zheng Y. Optic disc detection from fundus photography via best-buddies similarity. Applied Sciences, vol. 8, pp. 709, 2018.
  • Ren X, Zheng Y, Zhao Y, Luo C, Wang H, Lian J, He Y. Drusen segmentation from retinal images via supervised feature learning. IEEE Access, vol. 6, pp. 2952–2961, 2017.
  • He Y, Zheng Y, Zhao Y, Ren Y, Lian J, Gee J. Retinal image denoising via bilateral filter with a spatial kernel of optimally oriented line spread function. Computational and mathematical methods in medicine, vol. 2017, 2017.
  • Song S, Zheng Y, He Y. A review of methods for bias correction in medical images. Biomedical Engineering Review. vol. 1, No: 1, 2017.
  • Cong J, Wei B, He Y, Yin Y, Zheng Y. A selective ensemble classification method combining mammography images with ultrasound images for breast cancer diagnosis. Computational and mathematical methods in medicine, vol. 2017, 2017.

Conference Presentations

  • 15th IEEE International Conference on Signal Processing (ICSP 2020), Beijing, China, December 6-9, 2020, poster presentation.
  • 11th International Conference on Functional Imaging and Modeling of the Heart (FIMH 2021), Stanford, CA, USA, June 21-25, LNCS, oral presentation.
  • 2nd Sino-French Workshop on “Medical Image Analysis and AI”, Virtual, France, October 25-26, 2021, oral presentation.
  • IEEE ICSP’22 & 3rd Sino-French Workshop 2022, Beijing, China, October 21-24, 2022, oral presentation.

Awards

2022 Best Paper of conference IEEE ICSP 2022

2018 China Scholarship Council (CSC) Scholarship

2017 Postgraduate academic excellence scholarship, Outstanding Master’s thesis

2017 Patent award, granted No. CN107146211A

2016 Excellence postgraduate scholarship

2015 Outstanding graduate student

2014 Outstanding library volunteers, outstanding youth volunteers

Reviewing Activities

2019-2020 Served as regular reviewer for many journals related to doctoral project, including:

  • Neural Computing and Applications (NCAA)
  • IEEE Transactions on Industrial Informatics
  • IEEE Network Magazine

Grant

Grant No. 61572300 

PI: Yuanjie Zheng

Funding Organization: National Natural Science Foundation of China

Amount Awarded: ¥ 640,000 

Period of Grant Award: from 2016-01-01 to 2019-12-31.

Title of Project: Key techniques for automatic analysis of retinal optical coherence tomography (OCT) images.

Role on Project: Designed and implemented a part of experiments, independently completed some research problems related to retinal image segmentation.

Referees

Yuemin Zhu

Professor and Permanent CNRS Research Director, 

CREATIS CNRS UMR 5220 & INSERM unit 1044

Building B. Pascal INSA Lyon 69621 Villeurbanne cedex France

E mail : zhu@creatis.insa-lyon.fr

Tel. +33 4 72 43 89 74 Fax. +33 4 72 43 85 26

Yuanjie Zheng 

Professor, Ph.D. Supervisor, and Vice-dean of Information and Science and Engineering, Shandong Normal University

Taishan Scholar of People’s Government of Shandong Province, China

Senior Research Investigator, University of Pennsylvania

E-mail: zhengyuanjie@gmail.com 

Tel: +86 18366139958

Wen Gao 

Professor and Director, Faculty of Information and Engineering Sciences, Peking University, China

Member, Chinese Academy of Engineering

E-mail: wgao@pku.edu.cn.com 

Tel: +86 13901067293

Timeline

Doctoral Researcher

INSA-Lyon, CREATIS
10.2018 - 10.2022

Ph.D. - Signal & image processing

INSA-Lyon
10.2018 -

Graduate Teaching Assistant & Research Assistant

ICIS lab, Shandong Normal University
07.2017 - 07.2018

M.E. - Computer vision & medical image analysis

Shandong Normal University
09.2014 -

Graduate Researcher

ICIS Lab, Shandong Normal University
06.2014 - 06.2017

B.S. - Computer Science

Shandong Normal University
09.2011 -
Yunlong HE